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Molecular dynamics
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#	Item
441	The well-tempered ensemble Prof. Michele Parrinello ETH Zürich, Department of Chemistry and Applied Biosciences, Computational Science, USI-Campus, Via Giuseppe Buffi 13, 6900 Lugano, Switzerland In order to alleviate t Add to Reading List Source URL: www.iccs-meeting.org Language: English - Date: 2014-05-21 12:06:50 Science Computational chemistry Metadynamics Theoretical chemistry Canonical ensemble Michele Parrinello Statistical ensemble Parallel tempering Partition function Molecular dynamics Chemistry Physics
442	Simulation protocol to obtain open pore i-v characteristics of graphene nanopore. Explained below is a step by step procedure, with all relevent simulation parameters, to configure graphene nanopore membrane in NAMD and Add to Reading List Source URL: www.ks.uiuc.edu Language: English - Date: 2014-03-18 23:04:16 Quantum mechanics Emerging technologies Graphene Nanomaterials Nanopore Molecular dynamics Chemical bond Chemistry Physics Nanotechnology
443	Abstracts of Invited Talks Natan Andrei Rutgers University Add to Reading List Source URL: www.math.rutgers.edu Language: English - Date: 2015-04-29 14:31:42 Non-equilibrium thermodynamics Critical phenomena Lattice models Integrable system Chaos theory Ising model Economic model Dynamics Molecular dynamics Physics Statistical mechanics Renormalization group
444	Nucleic Acids Research Advance Access published August 12, 2014 Nucleic Acids Research, doi: nar/gku563 Multiple LacI-mediated loops revealed by Bayesian statistics and tethered particle motion Add to Reading List Source URL: www.rpgroup.caltech.edu Language: English - Date: 2014-08-13 16:42:03 DNA Helices Biophysics Lac operon DNA supercoil Two-state trajectory Tethered particle motion Lac repressor Molecular dynamics Biology Gene expression Genetics
445	Experiences Developing and Maintaining Scientific Applications on GPU-Accelerated Platforms John E. Stone Theoretical and Computational Biophysics Group Beckman Institute for Advanced Science and Technology Add to Reading List Source URL: www.ks.uiuc.edu Language: English - Date: 2013-10-18 12:10:38 Computing GPGPU Video cards Visual Molecular Dynamics Nvidia CUDA Graphics processing unit Beckman Institute Urbana Illinois Graphics hardware Computer hardware Champaign County Illinois
446	Skipping Steps in Deformable Simulation with Online Model Reduction Theodore Kim1,2 University of Saskatchewan1 Doug L. James2 Cornell University2 Add to Reading List Source URL: www.mat.ucsb.edu Language: English - Date: 2012-03-13 17:07:09 Computational physics Computational chemistry Molecular dynamics Numerical analysis Operations research Simulation Constraint algorithm Integrator Numerical integration Computational science Mathematics Science
447	Microsoft PowerPoint - ahpcs2012_stone [Compatibility Mode] Add to Reading List Source URL: www.ks.uiuc.edu Language: English - Date: 2012-06-08 11:08:29 Computational chemistry Bioinformatics Visual Molecular Dynamics Molecular modelling Computer graphics Tachyon Molecular dynamics Visualization BALL Science Application software Software
448	Journal of Nuclear Materials 329––1160 www.elsevier.com/locate/jnucmat Molecular dynamics simulation of displacement cascades in Fe–Cr alloys L. Malerba Add to Reading List Source URL: www.neutron.kth.se Language: English Crystallographic defects Physics Collision cascade Cluster chemistry Threshold displacement energy Frenkel defect Ferrite Condensed matter physics Materials science Chemistry
449	Theory on the Coupled Stochastic Dynamics of Transcription and Splice-Site Recognition Rajamanickam Murugan1,2, Gabriel Kreiman2,3,4* 1 Department of Biotechnology, Indian Institute of Technology Madras, Chennai, India, Add to Reading List Source URL: klab.tch.harvard.edu Language: English - Date: 2012-11-02 13:16:48 RNA splicing Gene expression RNA Molecular biology Alternative splicing Exon SnRNP Precursor mRNA Intron Biology Genetics Spliceosome
450	Microsoft PowerPoint - gtc2012_stone [Compatibility Mode] Add to Reading List Source URL: www.ks.uiuc.edu Language: English Graphics hardware GPGPU Visual Molecular Dynamics Molecular modelling Computational chemistry Video cards CUDA Bioinformatics Beckman Institute Science Champaign County Illinois Computer hardware

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